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KMID : 0364820170530020137
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Korean Journal of Microbiology
2017 Volume.53 No. 2 p.137 ~ p.140
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Genome sequence of Caballeronia sordidicola strain PAMC 26510 isolated from Psoroma sp., an Antarctic lichen
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Yang Jhung-Ahn
Hong Soon-Gyu
Oh Hyun-Myung
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Abstract
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Caballeronia sordidicola strain PAMC 26510 was isolated from Psoroma sp., a lichen material, collected from Barton Peninsula of King George Island in Antarctica. The draft genome sequence of PAMC 26510 consisted of 224 contigs and they was 7,872,143 base pairs with 59.7% G+C content. The genome included 7,580 protein coding sequences and 6 ribosomal RNA genes and 46 tRNA genes. The strain PAMC 26510 is also a metabolic generalist as we have observed in previous genomic studies in the arctic strain of Caballeronia sordidicola. The draft genomic sequences of PAMC 26510 had six CRISPR arrays on six contigs, and there were two clusters of CRISPR-associated genes that were linked with respective CRISPR arrays.
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KEYWORD
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Caballeronia sordidicola, Psoroma species, Antarctic, lichen
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